Publications et chapitres d’ouvrages UREL

    2026

    Free-living amoebae act as transient permissive hosts for Leptospira spp.

    Adriana Luga, Catherine Inizan, Eva Meunier, Amélie Albon, Valérie Burtet-Sarramegna, Mathieu Picardeau, Cyrille Goarant & Roman Thibeaux.

    En révision dans Plos Neglected Tropical Diseases.

    Comparison of Leptosira concentrations in two rivers within contrasting catchments in a Leptospirosis hotspot.

    Thibeaux, R, Genthon, P, Govan, R, Selmaoui-Folcher, N, Peltier, A, Kainiu, M, Soupé-Gilbert, M.-E, Yu, O, Tramier, C, Wijesurriya, K, Goarant, C

    En révision dans Journal of Contaminant Hydrology

    Epidemiology, Clinical Characteristics, and Biomarkers Associated with Severe Leptospirosis During the 2021 Outbreak in New Caledonia

    Cécile Cazorla, Julie Cagliero, Clara Deodati, Benjamin Jeanne, Marie-Estelle Soupe-Gibert, Julien Colot, Arnaud Cannet, Ann-Claire Gourinat, Patrick Lefevre, Julien Lebon, François Baur, Cyrille Goarant, Anne Loarec, Roman Thibeaux

    En soumission

    2025

    A Modular Workflow for Quantitative, Structural and Functional Analysis of Leptospira Biofilms.

    Davignon G, Thibeaux R. J Vis Exp. 2025 Dec 19;(226). doi: 10.3791/69511. PMID: 41490174

    Detection of pathogenic Leptospira spp. in peridomestic Rattus norvegicus in Hong Kong.

    Uea-Anuwong T, Wen C, Qing H, Li F, Thibeaux R, Magouras I. One Health. 2025 Jul 30;21:101158. doi: 10.1016/j.onehlt.2025.101158. eCollection 2025 Dec. PMID: 40822317 Free PMC article.

    Spatio-temporal risk prediction of leptospirosis: A machine-learning-based approach.
    Govan R, Scherrer R, Fougeron B, Laporte-Magoni C, Thibeaux R, Genthon P, Fournier-Viger P, Goarant C, Selmaoui-Folcher N. PLoS Negl Trop Dis. 2025 Jan 16;19(1):e0012755. doi: 10.1371/journal.pntd.0012755. eCollection 2025 Jan.PMID: 39820517

    Anti-inflammatory cytokine profile and Jarisch-Herxheimer reaction in Leptospirosis patients: A prospective case-series study in New Caledonia.
    Cagliero J, Loarec A, Lebon J, Baur F, Lefevre P, Follenfant E, Goarant C, Ukeiwe D, Colot J, Tardieu S, Werts C, Cazorla C. PLoS Negl Trop Dis. 2025 Sep 23;19(9):e0013189. doi: 10.1371/journal.pntd.0013189. eCollection 2025 Sep.PMID: 40986630 Free PMC article.

    2024

    Leptospira interrogans biofilm transcriptome highlights adaption to starvation and general stress while maintaining virulence.

    Davignon G, Pietrosemoli N, Benaroudj N, Soupé-Gilbert ME, Cagliero J, Turc É, Picardeau M, Guentas L, Goarant C, Thibeaux R. NPJ Biofilms Microbiomes. 2024 Sep 30;10(1):95. doi: 10.1038/s41522-024-00570-0. PMID: 39349472Free PMC article.

    Rainfall-driven resuspension of pathogenic Leptospira in a leptospirosis hotspot.
    Thibeaux R, Genthon P, Govan R, Selmaoui-Folcher N, Tramier C, Kainiu M, Soupé-Gilbert ME, Wijesuriya K, Goarant C. Sci Total Environ. 2024 Feb 10;911:168700. doi: 10.1016/j.scitotenv.2023.168700. Epub 2023 Nov 20. PMID: 37992819

    2023

    Leptospirosis: toward a better understanding of the environmental lifestyle of Leptospira. 

    Davignon G, Cagliero J, Guentas L, Bierque E, Genthon P, Gunkel-Grillon P, Juillot F, Kainiu M, Laporte-Magoni C, Picardeau M, Selmaoui-Folcher N, Soupé-Gilbert M-E, Tramier C, Vilanova J, Wijesuriya K, Thibeaux R and Goarant C (2023). Front. Water 5:1195094. doi: 10.3389/frwa.2023.1195094

    2022

    Leptospira
    Goarant C, Adler B, De la Peña Moctezuma A.
    in: Prescott, J.F., Boyce, J., MacInnes, J.I., Rycroft, A.N., Immerseel, F.V., Vázquez-Boland, J.A. (Eds.), Pathogenesis of Bacterial Infections in Animals, 5th Edition. Wiley Blackwell, pp. 502-527. Site de l’éditeur

    Pathogenic Leptospires Limit Dendritic Cell Activation Through Avoidance of TLR4 and TRIF Signaling.
    Cagliero J, Vernel-Pauillac F, Murray G, Adler B, Matsui M, Werts C. Frontiers in immunology 13, 911778. Texte intégral

    Original Leptospira spp. in island native terrestrial mammals: a case study in Pteropus spp. bats of New Caledonia.
    Soupé-Gilbert ME, Oedin M, Kainiu M, Girault D, Figuet O, Brescia F, Goarant C.
    Transboundary and Emerging Diseases. Site de l’éditeur

    Unraveling the invisible leptospirosis in mainland Southeast Asia and its fate under climate change.Douchet L, Goarant C, Mangeas M, Menkes C, Hinjoy S, Herbreteau V.
    Science of the Total Environment 832:155018. Texte intégral

    Clinical Evaluation of the Modified Faine Criteria in Patients Admitted with Suspected Leptospirosis to the Territorial Hospital, New Caledonia, 2018 to 2019.Guibreteau H, Tarantola A, Goarant C, Gervolino S, Gourinat AC, Colot J, Cazorla C, Klement-Frutos E.
    The American journal of tropical medicine and hygiene 106(2):486-493. Site de l’éditeur

    2021

    Leptospira ainlahdjerensis sp. nov., Leptospira ainazelensis sp. nov., Leptospira abararensis sp. nov. and Leptospira chreensis sp. nov., four new species isolated from water sources in Algeria.
    Korba AA, Lounici H, Kainiu M, Vincent AT, Mariet JF, Veyrier FJ, Goarant C, Dellagi K, Picardeau M.
    International journal of systematic and evolutionary microbiology 71(12) Site de l’éditeur

    Ending the neglect of treatable bacterial zoonoses responsible for non-malarial fevers
    Goarant C, Dellagi K, Picardeau M.
    Yale Journal of Biology and Medicine 94(2):351-360. Texte intégral/Full text

    2020

    Isolation and Culture of Leptospira from Clinical and Environmental Samples.
    Goarant C, Girault D, Thibeaux R, Soupé-Gilbert ME, 2020.
    Methods Mol Biol 2134: 1-9. site de l’éditeur

    Use of MALDI-ToF Mass Spectrometry for Identification of Leptospira.
    Girault D, Kainiu M, Barsac E, Thibeaux R, Goarant C, 2020.
    Methods Mol Biol 2134: 23-29. site de l’éditeur

    Biofilm Formation and Quantification Using the 96-Microtiter Plate.
    Thibeaux R, Kainiu M, Goarant C, 2020.
    Methods Mol Biol 2134: 207-214. site de l’éditeur

    Age-specific epidemiology of human leptospirosis in New Caledonia
    Klement-Frutos E, Tarantola A, Gourinat AC, Floury L, Goarant C.PLoS ONE 15(11):e0242886.  Texte intégral/Full text

    Escape of TLR5 Recognition by Leptospira spp.: A Rationale for Atypical Endoflagella.Holzapfel M, Bonhomme D, Cagliero J, Vernel-Pauillac F, Fanton d’Andon M, Bortolussi S, Fiette L, Goarant C, Wunder EA, Picardeau M, Ko AI, Werling D, Matsui M, Boneca IG, Werts C.Frontiers in Immunology. 11:2007 Texte intégral

    Leptospira interrogans retains direct virulence after long starvation in water.
    Bierque E, Soupé-Gilbert ME, Thibeaux R, Girault D, Guentas L, Goarant C.Current Microbiology 77(10):3035-3043.  Site de l’éditeur

    The zoonotic pathogen Leptospira interrogans mitigates environmental stress through cyclic-di-GMP-controlled biofilm production.
    Thibeaux R, Soupé-Gilbert ME, Kainiu M, Girault D, Bierque E, Fernandes J, Bähre H, Douyère A, Eskenazi N, Vinh J, Picardeau M, Goarant C.NPJ Biofilms Microbiomes. 6(1):24 Texte intégral/Full text

    Leptospira interrogans  and Leptospira kirschneri are the dominant Leptospira species causing human leptospirosis in Central Malaysia.

    Philip N, Bahtiar Affendy N, Ramli S, Arif M, Raja P, Nagandran E, Renganathan P, Taib NM, Masri SN, Yuhana MY, Than L, Seganathirajah M, Goarant C, Goris M, Sekawi Z, Neela VK
    PLoS Negl Trop Dis 14(3):e0008197. Texte intégral/Full text

    A systematic review of Leptospira in water and soil environments
    Bierque E, Thibeaux R, Girault D, Soupé-Gilbert ME, Goarant C
    PLoS One 15(1):e0227055. Texte intégral/Full text

    2019

    Leptospira and leptospirosis
    Goarant C, Trueba G, Bierque E, Thibeaux R, Davis B, De la Peña Moctezuma A, 2019
    In: J.B. Rose and B. Jiménez-Cisneros, (eds) Global Water Pathogen Project. ( A. Pruden, N. Ashbolt and J. Miller (eds) Part 3 Bacteria) Michigan State University, E. Lansing, MI, UNESCO.
    http://www.waterpathogens.org/book/Leptospira-and-leptospirosis Version pdf

    Health Challenges of the Pacific Region: Insights From History, Geography, Social Determinants, Genetics, and the Microbiome
    Horwood PF, Tarantola A, Goarant C, Matsui M, Klement E, Umezaki M, Navarro S, Greenhill AR
    Front. Immunol. 10: 2184. Texte intégral/Full text

    Counting Oceanians of Non-European, Non-Asian descent (ONENA) in the South Pacific to make them count in global health
    Tarantola A, Horwood PF, Goarant C, Buffière B, Bertrand S, Merilles OE, Pedron T, Klement-Frutos E, Sansonetti P, Quintana-Murci L, Richard V
    Trop Med Infect Dis 4: E114. Texte intégral/Full text

    Revisiting the taxonomy and evolution of pathogenicity of the genus Leptospira through the prism of genomics
    Vincent AT, Schiettekatte O, Goarant C, Neela VK, Bernet E, Thibeaux R, Ismail N, Mohd Khalid MK, Amran F, Masuzawa T, Nakao R, Amara Khorba A, Bourhy P, Veyrier FJ, Picardeau M
    PLoS Negl Trop Dis 13(5):e0007270. Texte intégral/Full text Format pdf

    Leptospirosis under the bibliometrics radar: evidence for a vicious circle of neglect
    Goarant C, Picardeau M, Morand S, K Marie McIntyre
    J Glob Health 9(1):010302. Texte intégral/Full text Format pdf

    2018

    Leptospirosis in French historical medical literature – Weil’s disease or Kelsch’s disease?
    Tarantola A, Goarant C.
    Am J Trop Med Hyg 99(6):1366-1368. doi: 10.4269/ajtmh.18-0629. Vers PubMed

    A large leptospirosis outbreak following successive severe floods in Fiji, 2012.
    Togami E, Kama M, Goarant C, Craig SB, Lau C, Ritter JM, Imrie A, Ko A, Nilles E.
    Am J Trop Med Hyg 99(4):849-851. doi: 10.4269/ajtmh.18-0335. Vers PubMed

    Evidence of human leptospirosis cases in a cohort of febrile patients in Bangui, Central African Republic: a retrospective study, 2012-2015.
    Rubbo PA, Soupé-Gilbert ME, Golongba DM, Mbombo F, Girault D, Nakoune E, Lombart JP, Breurec S, Goarant C.
    BMC Infect Dis 18(1):376. doi: 10.1186/s12879-018-3298-z. Texte intégral/Full text

    High incidence of leptospirosis in an observational study of hospital outpatients in Vanuatu highlights the need for improved awareness and diagnostic capacities.
    Pakoa JG, Soupé-Gilbert ME, Girault D, Takau D, Gaviga J, Gourinat AC, Tarantola A, Goarant C.
    PLoS Negl Trop Dis 12(6):e0006564. doi: 10.1371/journal.pntd.0006564. Texte intégral/Full text

    A systematic review of human and animal leptospirosis in the Pacific Islands reveals pathogen and reservoir diversity.
    Guernier V, Goarant C, Benshop J, Lau CL.
    PLoS Negl Trop Dis 2018 ; 12:e0006503. doi: 10.1371/
    journal.pntd.0006503. Texte intégral

    Biodiversity of environmental Leptospira: improving identification and revisiting the diagnosis.
    Thibeaux R, Girault D, Bierque E, Soupé-Gilbert ME, Rettinger A, Douyere A, Meyer M, Iraola G, Picardeau M, Goarant C.
    Frontiers in Microbiology 9: 816. doi: 10.3389/fmicb.2018.00816. Texte intégral

    Deciphering the unexplored Leptospira diversity from soils uncovers genomic evolution to virulence.

    Thibeaux R, Iraola G, Ferrés I, Bierque E, Girault D, Soupé-Gilbert ME, Picardeau M, Goarant C.
    Microbial Genomics  2018:4. doi: 10.1099/mgen.0.000144. Texte intégral

    Advances and challenges in barcoding pathogenic and environmental Leptospira.
    Guernier V, Allan KJ, Goarant C.
    Parasitology 145:595-607. doi: 10.1017/S0031182017001147. Vers PubMed

    2017

    Continuous excretion of Leptospira borgpetersenii Ballum in mice assessed by viability-quantitative PCR.
    Soupé-Gilbert ME, Bierque E, Geroult S, Teurlai M, Goarant C.
    Am J Trop Med Hyg 97(4):1088-1093. doi: 10.4269/ajtmh.17-0114. Vers PubMed

    Diagnostic présomptif de leptospirose avant la séroconversion : à propos de 338 cas à Wallis et Futuna de 2008 à 2015.
    Massenet D, Couteaux C, Goarant C.
    Annales de Biologie Clinique 75: 167-172. Vers PubMed

    High level of IL-10 expression in the blood of animal models possibly relates to resistance against leptospirosis.
    Matsui M, Roche L, Soupé-Gilbert ME, Hasan M, Monchy D, Goarant C.
    Cytokine 96: 144-151. Vers PubMed

    Seeking the environmental source of Leptospirosis reveals durable bacterial viability in river soils.
    Thibeaux R, Geroult S, Benezech C, Chabaud S, Soupé-Gilbert ME, Girault D, Bierque E, Goarant C.
    PLoS Negl Trop Dis 11: e0005414. Texte intégral/Full text

    Isolation of Leptospira from blood culture bottles.
    Girault D, Soupé-Gilbert ME, Geroult S, Colot J, Goarant C
    Diag Microbiol Infect Dis 88(1):17-19. Texte intégral/Full text

    2016 and before

    Leptospirosis: risk factors and management challenges in developing countries.
    Goarant C.
    Res Rep Trop Med 7: 49-62. Texte intégral

    Leptospirosis: risk factors and management challenges in developing countries.
    Goarant C.
    Res Rep Trop Med 7: 49-62. Texte intégral

    Cytokine and Chemokine expression in kidneys during chronic leptospirosis in reservoir and susceptible animal models.
    Matsui M, Roche L, Geroult S, Soupé-Gilbert ME, Monchy D, Huerre M, Goarant C.
    PLoS One 11(5):e0156084. Texte intégral

    Zika virus infection as an unexpected finding in a leptospirosis patient.
    Biron A, Cazorla C, Amar J, Pfannstiel A, Dupont-Rouzeyrol M, Goarant C.
    JMM Case Reports 3(3):e005033. Texte intégral

    An unprecedented high incidence of leptospirosis in Futuna, South Pacific, 2004 – 2014, evidenced by retrospective analysis of surveillance data
    Massenet D, Yvon JF, Couteaux C, Goarant C.
    PLoS One 10:e0142063. Texte intégral

    Leptospirosis after a stay in Madagascar.
    Pagès F, Kuli B, Moiton MP, Goarant C, Jaffar-Bandjee MC
    Journal of Travel Medicine 22:136-139. Vers PubMed

    Severity markers in severe leptospirosis: a cohort study.

    Makulski M, Boisier P, Lacassin F, Soupé-Gilbert ME, Mauron C, Bruyère-Ostells L, Bonte D, Barguil Y, Gourinat AC, Matsui M, Vernel-Pauillac F, Goarant C
    European Journal of Clinical Microbiology and Infectious Diseases 34:687-695. Vers PubMed

    Experimental hamster infection with a strain of Leptospira borgpetersenii Ballum isolated from a reservoir mouse in New Caledonia.
    Matsui M, Roche L, Soupé-Gilbert ME, Roudier M, Moniquet V, Goarant C
    Am J Trop Med Hyg 92:982-985. Vers PubMed

    A putative regulatory genetic locus modulates virulence in the pathogen Leptospira interrogans.
    Eshghi A, Becam J, Lambert A, Sismeiro O, Dillies M-A, Jagla B, Wunder E, Ko A, Coppee J-Y, Goarant C, Picardeau M. 2014
    Infection and Immunity 82(6):2542-2552. Vers PubMed

    Though not reservoirs, dogs might transmit Leptospira in New Caledonia.
    Gay N, Soupé-Gilbert ME, Goarant C. 2014
    International journal of environmental research and public health 11:4316-4325. Texte intégral

    El Niño Southern Oscillation and leptospirosis outbreaks in New Caledonia.
    Weinberger D, Baroux N, Grangeon J-P, Ko AI, Goarant C. 2014
    PLoS neglected tropical diseases 8(4):e2798. Texte intégral

    An exotic case of leptospirosis imported into an endemic area.
    Goarant C, Colot J, Faelchlin E, Ponchet M, Soupé-Gilbert ME, Descloux E, Gourinat A-C. 2014
    Travel Medicine and Infectious Disease 12:198-200. Vers PubMed

    Leptospirosis: Time to move to molecular epidemiology: Comments on « Reassessment of MLST schemes for Leptospira spp. typing worldwide » by Varni and colleagues.
    Goarant C. 2014
    Infection Genetics and Evolution 2014:484-485. Vers PubMed

    Association between age and severity to leptospirosis in children.

    Guerrier G, Hie P, Gourinat AC, Huguon E, Polfrit Y, Goarant C, D’Ortenzio E, Missote I. 2013.
    PLoS Neglected Tropical Diseases 7:e2436. Texte intégral

    Sensitivity and specificity of a new Vertical Flow Rapid Diagnostic Test for the serodiagnosis of human leptospirosis.
    Goarant C, Bourhy P, D’Ortenzio E, Dartevelle S, Mauron C, Soupé-Gilbert ME, Bruyère-Ostells L, Gourinat AC, Picardeau M, Nato F, Chanteau S. 2013
    PLoS Neglected Tropical Diseases 7:e2289. Texte intégral

    Leptospirosis risk increases with changes in species composition of rat populations.
    Theuerkauf J, Perez J, Taugamoa A, Niutoua I, Labrousse D, Gula R, Bogdanowicz H, Jourdan H, Goarant C. 2013
    Naturwissenschaften 100:385-388. Texte intégral

    Risk Factors and Predictors of Severe Leptospirosis in New Caledonia.
    Tubiana S, Mikulski M, Becam J, Lacassin F, Lefèvre P, Gourinat AC, Goarant C, D’Ortenzio E. 2013
    PLoS Neglected Tropical Diseases 7:e1991. Texte intégral

    Differential in vivo gene expression of major Leptospira proteins in resistant or susceptible animal models.
    Matsui, M., Soupe M. E., Becam J., Goarant C. 2012
    Applied and Environmental Microbiology 78(17):6372-6376. vers PubMed

    Rodent abundance dynamics and leptospirosis carriage in an area of hyper-endemicity in New Caledonia.
    Perez J, Brescia F, Becam J, Mauron C, Goarant C. 2011
    PLoS Neglected Tropical Diseases 5(10):e1361. Texte intégral

    Gene expression profiles of immune mediators and histopathological findings in animal models of leptospirosis : comparison between susceptible hamsters and resistant mice.
    Matsui M, Rouleau V, Bruyère-Ostells L, Goarant C. 2011
    Infection and Immunity 79(11):4480-4492. vers PubMed

    Differential cytokine gene expression according to outcome in a hamster model of leptospirosis.
    Vernel-Pauillac F, Goarant C 2010
    PloS Neglected Tropical Diseases 2010; 4(1):e582. Texte intégral

    Rapid Leptospira identification by direct sequencing of the diagnostic PCR products in New Caledonia.
    Perez J, Goarant C. 2010
    BMC Microbiology 10:325. Texte intégral

    [Hospital based active surveillance of human leptospirosis in Cambodia.].
    Berlioz-Arthaud A, Guillard B, Goarant C, Hem S. 2010
    Bulletin de la Société de Pathologie Exotique 103(2):111-118. vers PubMed

    Leptospira : the dawn of the molecular genetics era for an emerging zoonotic pathogen.
    Ko AI, Goarant C, Picardeau M.  2009
    Nature Reviews Microbiology 7(10):736-47. vers PubMedv

    [Hospital based active surveillance of human leptospirosis in Cambodia.].
    Berlioz-Arthaud A, Guillard B, Goarant C, Hem S. 2010
    Bulletin de la Société de Pathologie Exotique 103(2):111-118. vers PubMed

    Leptospira : the dawn of the molecular genetics era for an emerging zoonotic pathogen.
    Ko AI, Goarant C, Picardeau M.  2009
    Nature Reviews Microbiology 7(10):736-47. vers PubMed

    Outbreak of leptospirosis in New Caledonia : diagnosis issues and burden of disease.
    Goarant C, Laumond-Barny S, Perez J, Vernel-Pauillac F, Chanteau S, Guigon A.  2009
    Tropical Medicine and International Health 14(8):926-9. vers PubMed

    Bilan de cinq années de surveillance biologique de la leptospirose humaine en Nouvelle-Calédonie (2001-2005).
    Berlioz-Arthaud A, Merien F, Baranton G.  2007
    Bulletin de la Société de Pathologie Exotique 100: 133-138. vers PubMed

    Proinflammatory and immunomodulatory cytokine mRNA time course profiles in hamsters infected with a virulent variant of Leptospira interrogans.
    Vernel-Pauillac F, Merien F.  2006
    Infection and Immunity 74(7):4172-9. Texte intégral

    Application of multilocus variable-number tandem-repeat analysis for molecular typing of the agent of leptospirosis.
    Salaün L, Mérien F, Gurianova S, Baranton G, Picardeau M. 2006.
    Journal of Clinical Microbiology 44(11):3954-62.Texte intégral

    A rapid and quantitative method for the detection of Leptospira species in human leptospirosis.
    Merien F, Portnoi D, Bourhy P, Charavay F, Berlioz-Arthaud A, Baranton G. 2005
    FEMS Microbiology Letters 249(1):139-47. vers PubMed